Last updated on 2025-03-20 06:54:12 CET.
| Package | ERROR | OK |
|---|---|---|
| epidatr | 9 | 6 |
Current CRAN status: ERROR: 9, OK: 6
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘epidatr.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7934 bytes
Input file size = 8792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
Output IDAT size = 7311 bytes (623 bytes decrease)
Output file size = 7389 bytes (1403 bytes = 15.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25266 bytes
Input file size = 25380 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
Output IDAT size = 20453 bytes (4813 bytes decrease)
Output file size = 20531 bytes (4849 bytes = 19.11% decrease)
--- finished re-building ‘epidatr.Rmd’
--- re-building ‘signal-discovery.Rmd’ using rmarkdown
Quitting from signal-discovery.Rmd:77-79 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building ‘signal-discovery.Rmd’
--- re-building ‘versioned-data.Rmd’ using rmarkdown
--- finished re-building ‘versioned-data.Rmd’
SUMMARY: processing the following file failed:
‘signal-discovery.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(epidatr)
>
> test_check("epidatr")
Request failed [503]. Retrying in 1.6 seconds...
Request failed [503]. Retrying in 1 seconds...
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 323 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-request.R:3:3'): requesting works ────────────────────────────
res$status_code (`actual`) not equal to 414 (`expected`).
`actual`: 503.0
`expected`: 414.0
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 323 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘epidatr.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7934 bytes
Input file size = 8792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
Output IDAT size = 7311 bytes (623 bytes decrease)
Output file size = 7389 bytes (1403 bytes = 15.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25266 bytes
Input file size = 25380 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
Output IDAT size = 20453 bytes (4813 bytes decrease)
Output file size = 20531 bytes (4849 bytes = 19.11% decrease)
--- finished re-building ‘epidatr.Rmd’
--- re-building ‘signal-discovery.Rmd’ using rmarkdown
Quitting from signal-discovery.Rmd:77-79 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building ‘signal-discovery.Rmd’
--- re-building ‘versioned-data.Rmd’ using rmarkdown
--- finished re-building ‘versioned-data.Rmd’
SUMMARY: processing the following file failed:
‘signal-discovery.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘epidatr.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7928 bytes
Input file size = 8786 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333
Output IDAT size = 7333 bytes (595 bytes decrease)
Output file size = 7411 bytes (1375 bytes = 15.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25033 bytes
Input file size = 25147 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919
Output IDAT size = 18919 bytes (6114 bytes decrease)
Output file size = 18997 bytes (6150 bytes = 24.46% decrease)
--- finished re-building ‘epidatr.Rmd’
--- re-building ‘signal-discovery.Rmd’ using rmarkdown
Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd)
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building ‘signal-discovery.Rmd’
--- re-building ‘versioned-data.Rmd’ using rmarkdown
--- finished re-building ‘versioned-data.Rmd’
SUMMARY: processing the following file failed:
‘signal-discovery.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘epidatr.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7928 bytes
Input file size = 8786 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333
Output IDAT size = 7333 bytes (595 bytes decrease)
Output file size = 7411 bytes (1375 bytes = 15.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25033 bytes
Input file size = 25147 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919
Output IDAT size = 18919 bytes (6114 bytes decrease)
Output file size = 18997 bytes (6150 bytes = 24.46% decrease)
--- finished re-building ‘epidatr.Rmd’
--- re-building ‘signal-discovery.Rmd’ using rmarkdown
Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd)
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building ‘signal-discovery.Rmd’
--- re-building ‘versioned-data.Rmd’ using rmarkdown
--- finished re-building ‘versioned-data.Rmd’
SUMMARY: processing the following file failed:
‘signal-discovery.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'epidatr.Rmd' using rmarkdown
--- finished re-building 'epidatr.Rmd'
--- re-building 'signal-discovery.Rmd' using rmarkdown
Quitting from signal-discovery.Rmd:77-79 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building 'signal-discovery.Rmd'
--- re-building 'versioned-data.Rmd' using rmarkdown
--- finished re-building 'versioned-data.Rmd'
SUMMARY: processing the following file failed:
'signal-discovery.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘epidatr.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7934 bytes
Input file size = 8792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
Output IDAT size = 7311 bytes (623 bytes decrease)
Output file size = 7389 bytes (1403 bytes = 15.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25266 bytes
Input file size = 25380 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
Output IDAT size = 20453 bytes (4813 bytes decrease)
Output file size = 20531 bytes (4849 bytes = 19.11% decrease)
--- finished re-building ‘epidatr.Rmd’
--- re-building ‘signal-discovery.Rmd’ using rmarkdown
Quitting from signal-discovery.Rmd:77-79 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building ‘signal-discovery.Rmd’
--- re-building ‘versioned-data.Rmd’ using rmarkdown
--- finished re-building ‘versioned-data.Rmd’
SUMMARY: processing the following file failed:
‘signal-discovery.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘epidatr.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7934 bytes
Input file size = 8792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311
Output IDAT size = 7311 bytes (623 bytes decrease)
Output file size = 7389 bytes (1403 bytes = 15.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25266 bytes
Input file size = 25380 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453
Output IDAT size = 20453 bytes (4813 bytes decrease)
Output file size = 20531 bytes (4849 bytes = 19.11% decrease)
--- finished re-building ‘epidatr.Rmd’
--- re-building ‘signal-discovery.Rmd’ using rmarkdown
Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd)
Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics:
ℹ In index: 457.
ℹ With name: nhsn:confirmed_admissions_covid_ew.
Caused by error:
! Result must be length 1, not 0.
--- failed re-building ‘signal-discovery.Rmd’
--- re-building ‘versioned-data.Rmd’ using rmarkdown
--- finished re-building ‘versioned-data.Rmd’
SUMMARY: processing the following file failed:
‘signal-discovery.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64