CRAN Package Check Results for Package epidatr

Last updated on 2025-03-15 06:50:08 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.0 6.65 68.14 74.79 ERROR
r-devel-linux-x86_64-debian-gcc 1.2.0 4.12 50.52 54.64 ERROR
r-devel-linux-x86_64-fedora-clang 1.2.0 120.62 ERROR
r-devel-linux-x86_64-fedora-gcc 1.2.0 163.44 ERROR
r-devel-macos-arm64 1.2.0 64.00 OK
r-devel-macos-x86_64 1.2.0 106.00 OK
r-devel-windows-x86_64 1.2.0 8.00 113.00 121.00 ERROR
r-patched-linux-x86_64 1.2.0 ERROR
r-release-linux-x86_64 1.2.0 6.27 63.07 69.34 ERROR
r-release-macos-arm64 1.2.0 59.00 OK
r-release-macos-x86_64 1.2.0 126.00 OK
r-release-windows-x86_64 1.2.0 12.00 104.00 116.00 ERROR
r-oldrel-macos-arm64 1.2.0 OK
r-oldrel-macos-x86_64 1.2.0 115.00 OK
r-oldrel-windows-x86_64 1.2.0 12.00 111.00 123.00 ERROR

Check Details

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘epidatr.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7934 bytes Input file size = 8792 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 Output IDAT size = 7311 bytes (623 bytes decrease) Output file size = 7389 bytes (1403 bytes = 15.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25266 bytes Input file size = 25380 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 Output IDAT size = 20453 bytes (4813 bytes decrease) Output file size = 20531 bytes (4849 bytes = 19.11% decrease) --- finished re-building ‘epidatr.Rmd’ --- re-building ‘signal-discovery.Rmd’ using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building ‘signal-discovery.Rmd’ --- re-building ‘versioned-data.Rmd’ using rmarkdown --- finished re-building ‘versioned-data.Rmd’ SUMMARY: processing the following file failed: ‘signal-discovery.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘epidatr.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7934 bytes Input file size = 8792 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 Output IDAT size = 7311 bytes (623 bytes decrease) Output file size = 7389 bytes (1403 bytes = 15.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25266 bytes Input file size = 25380 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 Output IDAT size = 20453 bytes (4813 bytes decrease) Output file size = 20531 bytes (4849 bytes = 19.11% decrease) --- finished re-building ‘epidatr.Rmd’ --- re-building ‘signal-discovery.Rmd’ using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building ‘signal-discovery.Rmd’ --- re-building ‘versioned-data.Rmd’ using rmarkdown --- finished re-building ‘versioned-data.Rmd’ SUMMARY: processing the following file failed: ‘signal-discovery.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘epidatr.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7928 bytes Input file size = 8786 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333 Output IDAT size = 7333 bytes (595 bytes decrease) Output file size = 7411 bytes (1375 bytes = 15.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25033 bytes Input file size = 25147 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919 Output IDAT size = 18919 bytes (6114 bytes decrease) Output file size = 18997 bytes (6150 bytes = 24.46% decrease) --- finished re-building ‘epidatr.Rmd’ --- re-building ‘signal-discovery.Rmd’ using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building ‘signal-discovery.Rmd’ --- re-building ‘versioned-data.Rmd’ using rmarkdown --- finished re-building ‘versioned-data.Rmd’ SUMMARY: processing the following file failed: ‘signal-discovery.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘epidatr.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7928 bytes Input file size = 8786 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7333 Output IDAT size = 7333 bytes (595 bytes decrease) Output file size = 7411 bytes (1375 bytes = 15.65% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25033 bytes Input file size = 25147 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18919 Output IDAT size = 18919 bytes (6114 bytes decrease) Output file size = 18997 bytes (6150 bytes = 24.46% decrease) --- finished re-building ‘epidatr.Rmd’ --- re-building ‘signal-discovery.Rmd’ using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building ‘signal-discovery.Rmd’ --- re-building ‘versioned-data.Rmd’ using rmarkdown --- finished re-building ‘versioned-data.Rmd’ SUMMARY: processing the following file failed: ‘signal-discovery.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.2.0
Check: tests
Result: ERROR Running 'testthat.R' [13s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(epidatr) > > test_check("epidatr") Request failed [503]. Retrying in 1 seconds... Request failed [503]. Retrying in 2.7 seconds... [ FAIL 1 | WARN 1 | SKIP 0 | PASS 323 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-request.R:3:3'): requesting works ──────────────────────────── res$status_code (`actual`) not equal to 414 (`expected`). `actual`: 503.0 `expected`: 414.0 [ FAIL 1 | WARN 1 | SKIP 0 | PASS 323 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'epidatr.Rmd' using rmarkdown --- finished re-building 'epidatr.Rmd' --- re-building 'signal-discovery.Rmd' using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building 'signal-discovery.Rmd' --- re-building 'versioned-data.Rmd' using rmarkdown --- finished re-building 'versioned-data.Rmd' SUMMARY: processing the following file failed: 'signal-discovery.Rmd' Error: Vignette re-building failed. Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘epidatr.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7934 bytes Input file size = 8792 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 Output IDAT size = 7311 bytes (623 bytes decrease) Output file size = 7389 bytes (1403 bytes = 15.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25266 bytes Input file size = 25380 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 Output IDAT size = 20453 bytes (4813 bytes decrease) Output file size = 20531 bytes (4849 bytes = 19.11% decrease) --- finished re-building ‘epidatr.Rmd’ --- re-building ‘signal-discovery.Rmd’ using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building ‘signal-discovery.Rmd’ --- re-building ‘versioned-data.Rmd’ using rmarkdown --- finished re-building ‘versioned-data.Rmd’ SUMMARY: processing the following file failed: ‘signal-discovery.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘epidatr.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7934 bytes Input file size = 8792 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7311 Output IDAT size = 7311 bytes (623 bytes decrease) Output file size = 7389 bytes (1403 bytes = 15.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/epidatr.Rcheck/vign_test/epidatr/vignettes/epidatr_files/figure-html/unnamed-chunk-8-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25266 bytes Input file size = 25380 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20453 Output IDAT size = 20453 bytes (4813 bytes decrease) Output file size = 20531 bytes (4849 bytes = 19.11% decrease) --- finished re-building ‘epidatr.Rmd’ --- re-building ‘signal-discovery.Rmd’ using rmarkdown Quitting from lines 78-79 [unnamed-chunk-6] (signal-discovery.Rmd) Error: processing vignette 'signal-discovery.Rmd' failed with diagnostics: ℹ In index: 457. ℹ With name: nhsn:confirmed_admissions_covid_ew. Caused by error: ! Result must be length 1, not 0. --- failed re-building ‘signal-discovery.Rmd’ --- re-building ‘versioned-data.Rmd’ using rmarkdown --- finished re-building ‘versioned-data.Rmd’ SUMMARY: processing the following file failed: ‘signal-discovery.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64