Functionalities for calculating the local score and calculating statistical relevance (p-value) to find a local Score in a sequence of given distribution (S. Mercier and J.-J. Daudin (2001) <https://hal.science/hal-00714174/>) ; S. Karlin and S. Altschul (1990) <https://pmc.ncbi.nlm.nih.gov/articles/PMC53667/> ; S. Mercier, D. Cellier and F. Charlot (2003) <https://hal.science/hal-00937529v1/> ; A. Lagnoux, S. Mercier and P. Valois (2017) <doi:10.1093/bioinformatics/btw699> ).
| Version: | 2.0.1 |
| Depends: | R (≥ 3.2.0) |
| Imports: | Rcpp (≥ 0.12.16), utils |
| LinkingTo: | Rcpp |
| Suggests: | knitr, rmarkdown, testthat (≥ 2.1.0) |
| Published: | 2025-02-24 |
| DOI: | 10.32614/CRAN.package.localScore |
| Author: | Sebastian Simon [aut], Chris Verschelden [aut], Charly Marty [aut], David Robelin [aut, cre], Sabine Mercier [aut], Sebastien Dejean [aut], The authors of Eigen the library for the included version of Eigen [cph] |
| Maintainer: | David Robelin <david.robelin at inrae.fr> |
| License: | GPL-2 | GPL-3 | file LICENSE [expanded from: GPL (≥ 2) | file LICENSE] |
| Copyright: | See the file COPYRIGHTS for various embedded Eigen library copyright details |
| NeedsCompilation: | yes |
| CRAN checks: | localScore results |
| Reference manual: | localScore.pdf |
| Vignettes: |
Exact distribution of excursions height (source, R code) Local Score Package (source, R code) |
| Package source: | localScore_2.0.1.tar.gz |
| Windows binaries: | r-devel: localScore_2.0.1.zip, r-release: localScore_2.0.1.zip, r-oldrel: localScore_2.0.1.zip |
| macOS binaries: | r-devel (arm64): localScore_2.0.1.tgz, r-release (arm64): localScore_2.0.1.tgz, r-oldrel (arm64): localScore_2.0.1.tgz, r-devel (x86_64): localScore_2.0.1.tgz, r-release (x86_64): localScore_2.0.1.tgz, r-oldrel (x86_64): localScore_2.0.1.tgz |
| Old sources: | localScore archive |
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