CRAN Package Check Results for Package treestats

Last updated on 2025-03-01 06:51:26 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.70.5 60.28 139.15 199.43 OK
r-devel-linux-x86_64-debian-gcc 1.70.5 47.99 90.35 138.34 OK
r-devel-linux-x86_64-fedora-clang 1.70.5 288.98 ERROR
r-devel-linux-x86_64-fedora-gcc 1.70.5 344.56 ERROR
r-devel-macos-arm64 1.70.5 94.00 OK
r-devel-macos-x86_64 1.70.5 161.00 OK
r-devel-windows-x86_64 1.70.5 66.00 199.00 265.00 OK
r-patched-linux-x86_64 1.70.5 61.50 128.22 189.72 OK
r-release-linux-x86_64 1.70.5 64.08 127.75 191.83 OK
r-release-macos-arm64 1.70.5 101.00 NOTE
r-release-macos-x86_64 1.70.5 168.00 NOTE
r-release-windows-x86_64 1.70.5 69.00 196.00 265.00 OK
r-oldrel-macos-arm64 1.70.5 NOTE
r-oldrel-macos-x86_64 1.70.5 233.00 NOTE
r-oldrel-windows-x86_64 1.70.5 82.00 246.00 328.00 OK

Check Details

Version: 1.70.5
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘Example_abc.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/treestats.Rcheck/vign_test/treestats/vignettes/Example_abc_files/figure-html/plot_simpl2-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 12883 bytes Input file size = 13753 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 11198 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 11198 Output IDAT size = 11198 bytes (1685 bytes decrease) Output file size = 11276 bytes (2477 bytes = 18.01% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/treestats.Rcheck/vign_test/treestats/vignettes/Example_abc_files/figure-html/plot_simple-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 21073 bytes Input file size = 21955 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19523 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19318 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19318 Output IDAT size = 19318 bytes (1755 bytes decrease) Output file size = 19396 bytes (2559 bytes = 11.66% decrease) Quitting from lines 86-102 [sim_ddd] (Example_abc.Rmd) Error: processing vignette 'Example_abc.Rmd' failed with diagnostics: variable 7 appears to be constant within groups --- failed re-building ‘Example_abc.Rmd’ --- re-building ‘Example_data.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/treestats.Rcheck/vign_test/treestats/vignettes/Example_data_files/figure-html/plot_size-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7446 bytes Input file size = 8304 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6569 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6549 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6549 Output IDAT size = 6549 bytes (897 bytes decrease) Output file size = 6627 bytes (1677 bytes = 20.20% decrease) Quitting from lines 61-64 [corr] (Example_data.Rmd) Error: processing vignette 'Example_data.Rmd' failed with diagnostics: NA/NaN/Inf in foreign function call (arg 10) --- failed re-building ‘Example_data.Rmd’ --- re-building ‘Getting_started.Rmd’ using rmarkdown --- finished re-building ‘Getting_started.Rmd’ --- re-building ‘Speed_improvement.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/treestats.Rcheck/vign_test/treestats/vignettes/Speed_improvement_files/figure-html/unnamed-chunk-2-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 11064 bytes Input file size = 11934 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10269 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10269 Output IDAT size = 10269 bytes (795 bytes decrease) Output file size = 10347 bytes (1587 bytes = 13.30% decrease) --- finished re-building ‘Speed_improvement.Rmd’ SUMMARY: processing the following files failed: ‘Example_abc.Rmd’ ‘Example_data.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.70.5
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘Example_abc.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/treestats.Rcheck/vign_test/treestats/vignettes/Example_abc_files/figure-html/plot_simpl2-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 13002 bytes Input file size = 13872 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11348 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 11334 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 11334 Output IDAT size = 11334 bytes (1668 bytes decrease) Output file size = 11412 bytes (2460 bytes = 17.73% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/treestats.Rcheck/vign_test/treestats/vignettes/Example_abc_files/figure-html/plot_simple-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 22351 bytes Input file size = 23233 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20732 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20489 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20489 Output IDAT size = 20489 bytes (1862 bytes decrease) Output file size = 20567 bytes (2666 bytes = 11.48% decrease) Quitting from lines 86-102 [sim_ddd] (Example_abc.Rmd) Error: processing vignette 'Example_abc.Rmd' failed with diagnostics: variable 7 appears to be constant within groups --- failed re-building ‘Example_abc.Rmd’ --- re-building ‘Example_data.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/treestats.Rcheck/vign_test/treestats/vignettes/Example_data_files/figure-html/plot_size-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7446 bytes Input file size = 8304 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6569 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6549 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6549 Output IDAT size = 6549 bytes (897 bytes decrease) Output file size = 6627 bytes (1677 bytes = 20.20% decrease) Quitting from lines 61-64 [corr] (Example_data.Rmd) Error: processing vignette 'Example_data.Rmd' failed with diagnostics: NA/NaN/Inf in foreign function call (arg 10) --- failed re-building ‘Example_data.Rmd’ --- re-building ‘Getting_started.Rmd’ using rmarkdown --- finished re-building ‘Getting_started.Rmd’ --- re-building ‘Speed_improvement.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/treestats.Rcheck/vign_test/treestats/vignettes/Speed_improvement_files/figure-html/unnamed-chunk-2-1.png 576x576 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 11064 bytes Input file size = 11934 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10269 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10269 Output IDAT size = 10269 bytes (795 bytes decrease) Output file size = 10347 bytes (1587 bytes = 13.30% decrease) --- finished re-building ‘Speed_improvement.Rmd’ SUMMARY: processing the following files failed: ‘Example_abc.Rmd’ ‘Example_data.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.70.5
Check: installed package size
Result: NOTE installed size is 8.6Mb sub-directories of 1Mb or more: doc 3.1Mb libs 5.0Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64