CRAN Package Check Results for Maintainer ‘Shannon T. Holloway <shannon.t.holloway at gmail.com>’

Last updated on 2025-03-30 06:52:26 CEST.

Package ERROR NOTE OK
AsynchLong 15
baclava 11 4
ChangepointTesting 15
CNVreg 1 14
CONCUR 15
contTimeCausal 15
DOVE 4 11
DTRreg 7 8
dtrSurv 15
DynTxRegime 15
FastKM 15
GGMridge 15
highTtest 7 8
ICODS 15
iDOVE 15
JMdesign 15
modelObj 15
OTRselect 15
POINT 15
POSTm 15
ramsvm 15
roboBayes 4 11
subdetect 12 3
SurvLong 7 8
tLagInterim 15
tLagPropOdds 15
VEwaning 15
VEwaningVariant 4 11

Package AsynchLong

Current CRAN status: OK: 15

Package baclava

Current CRAN status: NOTE: 11, OK: 4

Version: 1.0
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘aloocv.R’ ‘cohortODX.R’ ‘computeEndpoints.R’ ‘fit_baclava.R’ ‘predictODX.R’ ‘s3_methods.R’ ‘utilities.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 1.0
Check: installed package size
Result: NOTE installed size is 10.4Mb sub-directories of 1Mb or more: libs 10.1Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package ChangepointTesting

Current CRAN status: OK: 15

Package CNVreg

Current CRAN status: ERROR: 1, OK: 14

Version: 1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘CNVReg_vig.Rmd’ using rmarkdown Quitting from CNVReg_vig.Rmd:27-33 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! package or namespace load failed for 'kableExtra' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- Backtrace: ▆ 1. └─base::library("kableExtra") 2. └─base::tryCatch(...) 3. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 5. └─value[[3L]](cond) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'CNVReg_vig.Rmd' failed with diagnostics: package or namespace load failed for 'kableExtra' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'systemfonts' --- failed re-building ‘CNVReg_vig.Rmd’ SUMMARY: processing the following file failed: ‘CNVReg_vig.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-macos-arm64

Package CONCUR

Current CRAN status: OK: 15

Package contTimeCausal

Current CRAN status: OK: 15

Package DOVE

Current CRAN status: NOTE: 4, OK: 11

Version: 1.10
Check: installed package size
Result: NOTE installed size is 5.0Mb sub-directories of 1Mb or more: libs 4.4Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package DTRreg

Current CRAN status: NOTE: 7, OK: 8

Version: 2.2
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘Ahat.R’ ‘DTRreg.R’ ‘DWsurv.R’ ‘dtrProcedure.R’ ‘gest.R’ ‘inputProcessing.R’ ‘interactive.R’ ‘treatmentClasses.R’ ‘utils.R’ ‘varest.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64

Package dtrSurv

Current CRAN status: OK: 15

Package DynTxRegime

Current CRAN status: OK: 15

Package FastKM

Current CRAN status: NOTE: 15

Version: 1.1
Check: Rd files
Result: NOTE checkRd: (-1) KITdesign.Rd:36: Lost braces; missing escapes or markup? 36 | \item{trait}{One of {'c','d','s',NULL} indicating the type | ^ checkRd: (-1) KITkernel.Rd:51: Lost braces; missing escapes or markup? 51 | \item{trait}{One of {'c','d','s',NULL} indicating the type | ^ checkRd: (-1) geno.Rd:19: Lost braces; missing escapes or markup? 19 | Must be one of {'ibs', 'linear', 'quadratic'}. | ^ checkRd: (-1) geno.Rd:31: Lost braces; missing escapes or markup? 31 | {'add', 'dom', 'rec'} indicating additive, | ^ checkRd: (-1) nongeno.Rd:14: Lost braces; missing escapes or markup? 14 | Must be one of {'interactive', 'linear', 'quadratic'}. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘coxKM’ Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package GGMridge

Current CRAN status: OK: 15

Package highTtest

Current CRAN status: NOTE: 7, OK: 8

Version: 1.3
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘colorfulVennPlot’ Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package ICODS

Current CRAN status: OK: 15

Package iDOVE

Current CRAN status: OK: 15

Package JMdesign

Current CRAN status: OK: 15

Package modelObj

Current CRAN status: OK: 15

Package OTRselect

Current CRAN status: OK: 15

Package POINT

Current CRAN status: OK: 15

Package POSTm

Current CRAN status: OK: 15

Package ramsvm

Current CRAN status: OK: 15

Package roboBayes

Current CRAN status: NOTE: 4, OK: 11

Version: 1.2
Check: installed package size
Result: NOTE installed size is 6.9Mb sub-directories of 1Mb or more: libs 6.8Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package subdetect

Current CRAN status: NOTE: 12, OK: 3

Version: 1.2
Check: Rd files
Result: NOTE checkRd: (-1) subdetect-package.Rd:11: Lost braces in \itemize; meant \describe ? checkRd: (-1) subdetect-package.Rd:12: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package SurvLong

Current CRAN status: NOTE: 7, OK: 8

Version: 1.4
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘scoreFull.R’ ‘scoreHalf.R’ ‘scoreLVCF.R’ ‘scoreNVCF.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64

Package tLagInterim

Current CRAN status: OK: 15

Package tLagPropOdds

Current CRAN status: OK: 15

Package VEwaning

Current CRAN status: OK: 15

Package VEwaningVariant

Current CRAN status: NOTE: 4, OK: 11

Version: 1.4
Check: installed package size
Result: NOTE installed size is 5.0Mb sub-directories of 1Mb or more: libs 4.3Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64