Last updated on 2025-03-01 06:51:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.7 | 14.55 | 164.71 | 179.26 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.3.7 | 11.64 | 117.40 | 129.04 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.7 | 278.46 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.7 | 297.21 | ERROR | |||
| r-devel-macos-arm64 | 0.3.7 | 87.00 | OK | |||
| r-devel-macos-x86_64 | 0.3.7 | 173.00 | OK | |||
| r-devel-windows-x86_64 | 0.3.7 | 16.00 | 167.00 | 183.00 | OK | |
| r-patched-linux-x86_64 | 0.3.7 | 15.80 | 152.37 | 168.17 | OK | |
| r-release-linux-x86_64 | 0.3.7 | 14.54 | 152.16 | 166.70 | OK | |
| r-release-macos-arm64 | 0.3.7 | 81.00 | OK | |||
| r-release-macos-x86_64 | 0.3.7 | 121.00 | OK | |||
| r-release-windows-x86_64 | 0.3.7 | 16.00 | 160.00 | 176.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.7 | OK | ||||
| r-oldrel-macos-x86_64 | 0.3.7 | 149.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.3.7 | 22.00 | 199.00 | 221.00 | OK |
Version: 0.3.7
Check: examples
Result: ERROR
Running examples in ‘manymodelr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: agg_by_group
> ### Title: A convenient way to perform grouped operations
> ### Aliases: agg_by_group
>
> ### ** Examples
>
> head(agg_by_group(airquality,.~Month,sum))
Error in gsub(as.character(pattern), as.character(replacement), x, ignore.case, :
NA in coercion to Rboolean
Calls: head ... sub -> is.factor -> mysub -> sub -> is.factor -> gsub
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.3.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [10s/12s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(manymodelr)
Loading required package: caret
Loading required package: ggplot2
Loading required package: lattice
Loading required package: Metrics
Attaching package: 'Metrics'
The following objects are masked from 'package:caret':
precision, recall
Loading required package: e1071
Welcome to manymodelr. This is manymodelr version 0.3.7.
Please file issues and feedback at https://www.github.com/Nelson-Gon/manymodelr/issues
Turn this message off using 'suppressPackageStartupMessages(library(manymodelr))'
Happy Modelling! :)
> data("yields", package = "manymodelr")
> test_check("manymodelr")
[1] ### Ordered by height ###
[1] ### Ordered by height ###
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 94 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_agg_by_group.R:11:5'): agg_by_group test ───────────────────────
Error in `gsub(as.character(pattern), as.character(replacement), x, ignore.case,
perl, fixed, useBytes)`: NA in coercion to Rboolean
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test_agg_by_group.R:11:5
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─manymodelr::agg_by_group(yields, . ~ normal, length)
5. └─manymodelr:::agg_by_group.data.frame(yields, . ~ normal, length)
6. ├─base::trimws(...)
7. │ ├─base (local) mysub(...)
8. │ │ └─base::sub(re, "", x, perl = TRUE)
9. │ │ └─base::is.factor(x)
10. │ └─base (local) mysub(paste0("^", whitespace, "+"), x)
11. │ └─base::sub(re, "", x, perl = TRUE)
12. │ └─base::is.factor(x)
13. └─base::gsub(...)
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 94 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.3.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘correlations.rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118656 bytes
Input file size = 118902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
Output IDAT size = 104324 bytes (14332 bytes decrease)
Output file size = 104402 bytes (14500 bytes = 12.19% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 93239 bytes
Input file size = 93449 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
Output IDAT size = 74512 bytes (18727 bytes decrease)
Output file size = 74590 bytes (18859 bytes = 20.18% decrease)
--- finished re-building ‘correlations.rmd’
--- re-building ‘manymodelr_vignette.rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-20-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118656 bytes
Input file size = 118902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
Output IDAT size = 104324 bytes (14332 bytes decrease)
Output file size = 104402 bytes (14500 bytes = 12.19% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-21-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 93239 bytes
Input file size = 93449 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
Output IDAT size = 74512 bytes (18727 bytes decrease)
Output file size = 74590 bytes (18859 bytes = 20.18% decrease)
Quitting from lines 296-299 [unnamed-chunk-22] (manymodelr_vignette.rmd)
Error: processing vignette 'manymodelr_vignette.rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘manymodelr_vignette.rmd’
--- re-building ‘misc.rmd’ using rmarkdown
Quitting from lines 30-34 [unnamed-chunk-2] (misc.rmd)
Error: processing vignette 'misc.rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘misc.rmd’
--- re-building ‘modeling.rmd’ using rmarkdown
--- finished re-building ‘modeling.rmd’
SUMMARY: processing the following files failed:
‘manymodelr_vignette.rmd’ ‘misc.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.3.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/9s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(manymodelr)
Loading required package: caret
Loading required package: ggplot2
Loading required package: lattice
Loading required package: Metrics
Attaching package: 'Metrics'
The following objects are masked from 'package:caret':
precision, recall
Loading required package: e1071
Welcome to manymodelr. This is manymodelr version 0.3.7.
Please file issues and feedback at https://www.github.com/Nelson-Gon/manymodelr/issues
Turn this message off using 'suppressPackageStartupMessages(library(manymodelr))'
Happy Modelling! :)
> data("yields", package = "manymodelr")
> test_check("manymodelr")
[1] ### Ordered by height ###
[1] ### Ordered by height ###
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 94 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_agg_by_group.R:11:5'): agg_by_group test ───────────────────────
Error in `gsub(as.character(pattern), as.character(replacement), x, ignore.case,
perl, fixed, useBytes)`: NA in coercion to Rboolean
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test_agg_by_group.R:11:5
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─manymodelr::agg_by_group(yields, . ~ normal, length)
5. └─manymodelr:::agg_by_group.data.frame(yields, . ~ normal, length)
6. ├─base::trimws(...)
7. │ ├─base (local) mysub(...)
8. │ │ └─base::sub(re, "", x, perl = TRUE)
9. │ │ └─base::is.factor(x)
10. │ └─base (local) mysub(paste0("^", whitespace, "+"), x)
11. │ └─base::sub(re, "", x, perl = TRUE)
12. │ └─base::is.factor(x)
13. └─base::gsub(...)
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 94 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘correlations.rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118656 bytes
Input file size = 118902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
Output IDAT size = 104324 bytes (14332 bytes decrease)
Output file size = 104402 bytes (14500 bytes = 12.19% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 93239 bytes
Input file size = 93449 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
Output IDAT size = 74512 bytes (18727 bytes decrease)
Output file size = 74590 bytes (18859 bytes = 20.18% decrease)
--- finished re-building ‘correlations.rmd’
--- re-building ‘manymodelr_vignette.rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-20-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118656 bytes
Input file size = 118902 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104324
Output IDAT size = 104324 bytes (14332 bytes decrease)
Output file size = 104402 bytes (14500 bytes = 12.19% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-21-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 93239 bytes
Input file size = 93449 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 74512
Output IDAT size = 74512 bytes (18727 bytes decrease)
Output file size = 74590 bytes (18859 bytes = 20.18% decrease)
Quitting from lines 296-299 [unnamed-chunk-22] (manymodelr_vignette.rmd)
Error: processing vignette 'manymodelr_vignette.rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘manymodelr_vignette.rmd’
--- re-building ‘misc.rmd’ using rmarkdown
Quitting from lines 30-34 [unnamed-chunk-2] (misc.rmd)
Error: processing vignette 'misc.rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘misc.rmd’
--- re-building ‘modeling.rmd’ using rmarkdown
--- finished re-building ‘modeling.rmd’
SUMMARY: processing the following files failed:
‘manymodelr_vignette.rmd’ ‘misc.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.7
Check: examples
Result: ERROR
Running examples in ‘manymodelr-Ex.R’ failed
The error most likely occurred in:
> ### Name: agg_by_group
> ### Title: A convenient way to perform grouped operations
> ### Aliases: agg_by_group
>
> ### ** Examples
>
> head(agg_by_group(airquality,.~Month,sum))
Error in gsub(as.character(pattern), as.character(replacement), x, ignore.case, :
NA in coercion to bool
Calls: head ... sub -> is.factor -> mysub -> sub -> is.factor -> gsub
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [16s/21s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(manymodelr)
Loading required package: caret
Loading required package: ggplot2
Loading required package: lattice
Loading required package: Metrics
Attaching package: 'Metrics'
The following objects are masked from 'package:caret':
precision, recall
Loading required package: e1071
Welcome to manymodelr. This is manymodelr version 0.3.7.
Please file issues and feedback at https://www.github.com/Nelson-Gon/manymodelr/issues
Turn this message off using 'suppressPackageStartupMessages(library(manymodelr))'
Happy Modelling! :)
> data("yields", package = "manymodelr")
> test_check("manymodelr")
[1] ### Ordered by height ###
[1] ### Ordered by height ###
[ FAIL 1 | WARN 7 | SKIP 0 | PASS 94 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_agg_by_group.R:11:5'): agg_by_group test ───────────────────────
Error in `gsub(as.character(pattern), as.character(replacement), x, ignore.case,
perl, fixed, useBytes)`: NA in coercion to bool
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test_agg_by_group.R:11:5
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─manymodelr::agg_by_group(yields, . ~ normal, length)
5. └─manymodelr:::agg_by_group.data.frame(yields, . ~ normal, length)
6. ├─base::trimws(...)
7. │ ├─base (local) mysub(...)
8. │ │ └─base::sub(re, "", x, perl = TRUE)
9. │ │ └─base::is.factor(x)
10. │ └─base (local) mysub(paste0("^", whitespace, "+"), x)
11. │ └─base::sub(re, "", x, perl = TRUE)
12. │ └─base::is.factor(x)
13. └─base::gsub(...)
[ FAIL 1 | WARN 7 | SKIP 0 | PASS 94 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘correlations.rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118359 bytes
Input file size = 118605 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
Output IDAT size = 102759 bytes (15600 bytes decrease)
Output file size = 102837 bytes (15768 bytes = 13.29% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92706 bytes
Input file size = 92916 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
Output IDAT size = 72957 bytes (19749 bytes decrease)
Output file size = 73035 bytes (19881 bytes = 21.40% decrease)
--- finished re-building ‘correlations.rmd’
--- re-building ‘manymodelr_vignette.rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-20-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118359 bytes
Input file size = 118605 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
Output IDAT size = 102759 bytes (15600 bytes decrease)
Output file size = 102837 bytes (15768 bytes = 13.29% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-21-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92706 bytes
Input file size = 92916 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
Output IDAT size = 72957 bytes (19749 bytes decrease)
Output file size = 73035 bytes (19881 bytes = 21.40% decrease)
Quitting from lines 296-299 [unnamed-chunk-22] (manymodelr_vignette.rmd)
Error: processing vignette 'manymodelr_vignette.rmd' failed with diagnostics:
NA in coercion to bool
--- failed re-building ‘manymodelr_vignette.rmd’
--- re-building ‘misc.rmd’ using rmarkdown
Quitting from lines 30-34 [unnamed-chunk-2] (misc.rmd)
Error: processing vignette 'misc.rmd' failed with diagnostics:
NA in coercion to bool
--- failed re-building ‘misc.rmd’
--- re-building ‘modeling.rmd’ using rmarkdown
--- finished re-building ‘modeling.rmd’
SUMMARY: processing the following files failed:
‘manymodelr_vignette.rmd’ ‘misc.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.7
Check: examples
Result: ERROR
Running examples in ‘manymodelr-Ex.R’ failed
The error most likely occurred in:
> ### Name: agg_by_group
> ### Title: A convenient way to perform grouped operations
> ### Aliases: agg_by_group
>
> ### ** Examples
>
> head(agg_by_group(airquality,.~Month,sum))
Error in gsub(as.character(pattern), as.character(replacement), x, ignore.case, :
NA in coercion to Rboolean
Calls: head ... sub -> is.factor -> mysub -> sub -> is.factor -> gsub
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.3.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [15s/30s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(manymodelr)
Loading required package: caret
Loading required package: ggplot2
Loading required package: lattice
Loading required package: Metrics
Attaching package: 'Metrics'
The following objects are masked from 'package:caret':
precision, recall
Loading required package: e1071
Welcome to manymodelr. This is manymodelr version 0.3.7.
Please file issues and feedback at https://www.github.com/Nelson-Gon/manymodelr/issues
Turn this message off using 'suppressPackageStartupMessages(library(manymodelr))'
Happy Modelling! :)
> data("yields", package = "manymodelr")
> test_check("manymodelr")
[1] ### Ordered by height ###
[1] ### Ordered by height ###
[ FAIL 1 | WARN 7 | SKIP 0 | PASS 94 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_agg_by_group.R:11:5'): agg_by_group test ───────────────────────
Error in `gsub(as.character(pattern), as.character(replacement), x, ignore.case,
perl, fixed, useBytes)`: NA in coercion to Rboolean
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test_agg_by_group.R:11:5
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─manymodelr::agg_by_group(yields, . ~ normal, length)
5. └─manymodelr:::agg_by_group.data.frame(yields, . ~ normal, length)
6. ├─base::trimws(...)
7. │ ├─base (local) mysub(...)
8. │ │ └─base::sub(re, "", x, perl = TRUE)
9. │ │ └─base::is.factor(x)
10. │ └─base (local) mysub(paste0("^", whitespace, "+"), x)
11. │ └─base::sub(re, "", x, perl = TRUE)
12. │ └─base::is.factor(x)
13. └─base::gsub(...)
[ FAIL 1 | WARN 7 | SKIP 0 | PASS 94 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.3.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘correlations.rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118359 bytes
Input file size = 118605 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
Output IDAT size = 102759 bytes (15600 bytes decrease)
Output file size = 102837 bytes (15768 bytes = 13.29% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/manymodelr.Rcheck/vign_test/manymodelr/vignettes/correlations_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92706 bytes
Input file size = 92916 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
Output IDAT size = 72957 bytes (19749 bytes decrease)
Output file size = 73035 bytes (19881 bytes = 21.40% decrease)
--- finished re-building ‘correlations.rmd’
--- re-building ‘manymodelr_vignette.rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-20-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 118359 bytes
Input file size = 118605 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 102759
Output IDAT size = 102759 bytes (15600 bytes decrease)
Output file size = 102837 bytes (15768 bytes = 13.29% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/manymodelr.Rcheck/vign_test/manymodelr/vignettes/manymodelr_vignette_files/figure-html/unnamed-chunk-21-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92706 bytes
Input file size = 92916 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72957
Output IDAT size = 72957 bytes (19749 bytes decrease)
Output file size = 73035 bytes (19881 bytes = 21.40% decrease)
Quitting from lines 296-299 [unnamed-chunk-22] (manymodelr_vignette.rmd)
Error: processing vignette 'manymodelr_vignette.rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘manymodelr_vignette.rmd’
--- re-building ‘misc.rmd’ using rmarkdown
Quitting from lines 30-34 [unnamed-chunk-2] (misc.rmd)
Error: processing vignette 'misc.rmd' failed with diagnostics:
NA in coercion to Rboolean
--- failed re-building ‘misc.rmd’
--- re-building ‘modeling.rmd’ using rmarkdown
--- finished re-building ‘modeling.rmd’
SUMMARY: processing the following files failed:
‘manymodelr_vignette.rmd’ ‘misc.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc