Last updated on 2025-01-15 05:50:19 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.2 | 6.06 | 77.54 | 83.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.3 | 4.36 | 52.43 | 56.79 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.3 | 138.45 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.3 | 144.40 | OK | |||
| r-devel-windows-x86_64 | 1.0.2 | 9.00 | 72.00 | 81.00 | ERROR | |
| r-patched-linux-x86_64 | 1.0.2 | 5.90 | 71.78 | 77.68 | OK | |
| r-release-linux-x86_64 | 1.0.2 | 5.23 | 71.78 | 77.01 | OK | |
| r-release-macos-arm64 | 1.0.3 | 51.00 | OK | |||
| r-release-macos-x86_64 | 1.0.3 | 118.00 | OK | |||
| r-release-windows-x86_64 | 1.0.2 | 9.00 | 73.00 | 82.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.3 | 48.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.3 | 127.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.3 | 9.00 | 102.00 | 111.00 | OK |
Version: 1.0.2
Check: examples
Result: ERROR
Running examples in 'eudract-Ex.R' failed
The error most likely occurred in:
> ### Name: clintrials_gov_convert
> ### Title: applies a conversion using xslt from a simple xml file to a
> ### ClinicalTrials.gov compatible file, and checks against the schema
> ### Aliases: clintrials_gov_convert
>
> ### ** Examples
>
> safety_statistics <- safety_summary(safety,
+ exposed=c("Experimental"=60,"Control"=67))
> simple <- tempfile(fileext = ".xml")
> eudract <- tempfile(fileext = ".xml")
> ct <- tempfile(fileext = ".xml")
> simple_safety_xml(safety_statistics, simple)
'D:\temp\2025_01_13_01_50_00_7580\RtmpKU2RNy\file1e9b85e4115.xml' is created or modified
> eudract_convert(input=simple,
+ output=eudract)
'D:\temp\2025_01_13_01_50_00_7580\RtmpKU2RNy\file1e9b8329e7.xml' is created or modified
Please email cuh.cctu@nhs.net to tell us if you have successfully uploaded a study to EudraCT.
This is to allow us to measure the impact of this tool.
> clintrials_gov_convert(input=simple,
+ original=system.file("extdata", "1234.xml", package ="eudract"),
+ output=ct)
'D:\temp\2025_01_13_01_50_00_7580\RtmpKU2RNy\file1e9b8f9d6e04.xml' is created or modified
Please email cuh.cctu@nhs.net to tell us if you have successfully uploaded a study to ClinicalTrials.gov .
This is to allow us to measure the impact of this tool.
> ## Not run:
> ##D # This needs a real user account to work
> ##D clintrials_gov_upload(
> ##D input=simple,
> ##D orgname="CTU",
> ##D username="Student",
> ##D password="Guinness",
> ##D studyid="1234"
> ##D )
> ##D
> ## End(Not run)
>
>
>
> cleanEx()
Flavor: r-devel-windows-x86_64
Version: 1.0.2
Check: tests
Result: ERROR
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(eudract)
>
> test_check("eudract")
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64
Version: 1.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'eudract.Rmd' using rmarkdown
--- re-building 'standard_reporting.Rmd' using rmarkdown
--- finished re-building 'standard_reporting.Rmd'
SUMMARY: processing the following file failed:
'eudract.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64
Version: 1.0.2
Check: examples
Result: ERROR
Running examples in 'eudract-Ex.R' failed
The error most likely occurred in:
> ### Name: clintrials_gov_upload
> ### Title: applies a conversion using xslt from a simple xml file to a
> ### ClinicalTrials.gov compatible file, merges into a study record from
> ### the portal, and uploads the result.
> ### Aliases: clintrials_gov_upload
>
> ### ** Examples
>
> safety_statistics <- safety_summary(safety,
+ exposed=c("Experimental"=60,"Control"=67))
> simple <- tempfile(fileext = ".xml")
> eudract <- tempfile(fileext = ".xml")
> ct <- tempfile(fileext = ".xml")
> simple_safety_xml(safety_statistics, simple)
'D:\temp\2025_01_11_01_50_00_344\RtmpQ1BvMx\file199c454e01708.xml' is created or modified
> eudract_convert(input=simple,
+ output=eudract)
'D:\temp\2025_01_11_01_50_00_344\RtmpQ1BvMx\file199c41e5c73a7.xml' is created or modified
Flavor: r-release-windows-x86_64