* using log directory 'd:/Rcompile/CRANpkg/local/4.4/jlme.Rcheck' * using R version 4.4.2 (2024-10-31 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'jlme/DESCRIPTION' ... OK * this is package 'jlme' version '0.4.1' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'jlme' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [0s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s] OK * checking Rd files ... [0s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [5s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [36s] ERROR Running 'testthat.R' [36s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(jlme) > > test_check("jlme") Starting Julia ... Connecting to Julia TCP server at localhost:11980 ... [1] 11980 Julia version 1.8.5 detected. No active Julia connection. Please call `jlme_setup()`. [1] FALSE julia "C:\\PROGRA~1\\Julia\\bin\\julia.exe" Starting Julia (v1.8.5) ... Activating new project at `D:\temp\2025_01_11_01_50_00_344\jl_JaDes9` Updating registry at `C:\Users\CRAN\.julia\registries\General.toml` Resolving package versions... Installed NaNMath ────────── v1.0.3 Timing stopped at: 0.02 0.05 21.84 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 14 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-model.R:11:3'): (code run outside of `test_that()`) ──────────── Error: Evaluation in Julia failed. Original Julia error message: LoadError: Error when installing package MathOptInterface: IOError: open("C:\\Users\\CRAN\\.julia\\packages\\MathOptInterface\\PUD05\\src\\Bridges\\Constraint\\bridges\\ExponentialConeToScalarNonlinearFunctionBridge.jl", 769, 33206): no such file or directory (ENOENT) Stacktrace: [1] uv_error @ .\libuv.jl:97 [inlined] [2] open(path::String, flags::UInt16, mode::UInt64) @ Base.Filesystem .\filesystem.jl:105 [3] sendfile(src::String, dst::String) @ Base.Filesystem .\file.jl:994 [4] cptree(src::String, dst::String; force::Bool, follow_symlinks::Bool) @ Base.Filesystem .\file.jl:351 [5] cptree(src::String, dst::String; force::Bool, follow_symlinks::Bool) (repeats 4 times) @ Base.Filesystem .\file.jl:348 [6] cp(src::String, dst::String; force::Bool, follow_symlinks::Bool) @ Base.Filesystem .\file.jl:382 [7] rename(src::String, dst::String; force::Bool) @ Base.Filesystem .\file.jl:981 [8] rename @ .\file.jl:977 [inlined] [9] #mv#15 @ .\file.jl:426 [inlined] [10] install_archive(urls::Vector{Pair{String, Bool}}, hash::Base.SHA1, version_path::String; io::Base.PipeEndpoint) @ Pkg.Operations C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Operations.jl:563 [11] macro expansion @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Operations.jl:761 [inlined] [12] (::Pkg.Operations.var"#46#51"{Bool, Pkg.Types.Context, Tuple{SubString{String}, Dict{Base.UUID, Base.SHA1}}, Channel{Any}, Channel{NamedTuple{(:pkg, :urls, :path), Tuple{Pkg.Types.PackageEntry, Set{String}, String}}}})() @ Pkg.Operations .\task.jl:484 Stacktrace: [1] pkgerror(::String, ::Vararg{String}) @ Pkg.Types C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Types.jl:67 [2] macro expansion @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Operations.jl:783 [inlined] [3] macro expansion @ .\task.jl:454 [inlined] [4] download_source(ctx::Pkg.Types.Context; readonly::Bool) @ Pkg.Operations C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Operations.jl:724 [5] download_source @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Operations.jl:700 [inlined] [6] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}, new_git::Set{Base.UUID}; preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform) @ Pkg.Operations C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\Operations.jl:1278 [7] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform, kwargs::Base.Pairs{Symbol, Base.PipeEndpoint, Tuple{Symbol}, NamedTuple{(:io,), Tuple{Base.PipeEndpoint}}}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\API.jl:275 [8] add(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\API.jl:156 [9] add(pkgs::Vector{Pkg.Types.PackageSpec}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\API.jl:145 [10] #add#27 @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\API.jl:144 [inlined] [11] add(pkgs::Vector{String}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.8\Pkg\src\API.jl:144 [12] top-level scope @ string:4 [13] eval @ .\boot.jl:368 [inlined] [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base .\loading.jl:1428 [15] include_string (repeats 2 times) @ .\loading.jl:1438 [inlined] [16] mainevalcmd(str::String) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.4\JuliaConnectoR\Julia\evaluating.jl:150 [17] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}) @ Base .\essentials.jl:729 [18] invokelatest(::Any, ::Any, ::Vararg{Any}) @ Base .\essentials.jl:726 [19] evaluate!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket}) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.4\JuliaConnectoR\Julia\evaluating.jl:67 [20] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket}) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.4\JuliaConnectoR\Julia\evaluating.jl:55 [21] serve_repl(sock::Sockets.TCPSocket) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.4\JuliaConnectoR\Julia\communicating.jl:185 [22] (::Main.RConnector.var"#3#5")() @ Main.RConnector .\task.jl:484 in expression starting at string:4 Backtrace: ▆ 1. ├─base::print(...) at test-model.R:10:1 2. ├─base::system.time(...) 3. └─jlme::jlme_setup(restart = TRUE, verbose = TRUE) at test-model.R:11:3 4. ├─base::do.call(.jlme_setup, params) 5. └─jlme (local) ``(add = NULL, threads = NULL, verbose = TRUE) 6. └─jlme:::init_proj(add = add, verbose = verbose) 7. └─jlme::jl(...) 8. └─JuliaConnectoR::juliaEval(s_interpolated) 9. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr) 10. ├─base::tryCatch(...) 11. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 12. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 13. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 14. └─JuliaConnectoR:::doCallJulia(funName, jlargs) 15. └─JuliaConnectoR:::handleCallbacksAndOutput() [ FAIL 1 | WARN 0 | SKIP 0 | PASS 14 ] Error: Test failures Execution halted * checking PDF version of manual ... [28s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 1 ERROR